Utility Functions

The functions described here make up the main part of this library. They are useful if you want to do only certain parts of the analysis pipeline, or, for example, if you want to write a pipeline for a new experiment.

Parse Cytation10 reader files into a dataframe

import rda_toolbox as rda

rawdata = rda.parser.parse_readerfiles("<rawfiles_path>")

Row_384	Col_384	Raw Optical Density	AcD Barcode 384
A	1	1.123	001PrS01003
B	1	2.234	001PrS01003
...	...	...	...